Genome sequence of a white rot fungus Schizopora paradoxa KUC8140 for wood decay and mycoremediation.

نویسندگان

  • Byoungnam Min
  • Hongjae Park
  • Yeongseon Jang
  • Jae-Jin Kim
  • Kyoung Heon Kim
  • Jasmyn Pangilinan
  • Anna Lipzen
  • Robert Riley
  • Igor V Grigoriev
  • Joseph W Spatafora
  • In-Geol Choi
چکیده

Schizopora paradoxa KUC8140 is a white rot wood degrader commonly found in Korea. Tolerance to heavy metals and polycyclic aromatic hydrocarbons and dye decolorization activity make this strain a potential candidate for mycoremediation. We report the genome sequence of S. paradoxa KUC8140 containing 44.4Mbp. Based on ab initio gene prediction, homology search and RNA-seq, total 17,098 gene models were annotated. We identified 17 lignin-modifying peroxidases and other 377 carbohydrate-active enzymes for modeling lignocellulose deconstruction and mycoremediation.

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عنوان ژورنال:
  • Journal of biotechnology

دوره 211  شماره 

صفحات  -

تاریخ انتشار 2015